Used file: Entries: 112 Your provided set of 112 genes: FGSG_00172 FGSG_00267 FGSG_00642 FGSG_00742 FGSG_01060 FGSG_01139 FGSG_01531 FGSG_01594 FGSG_01736 FGSG_01751 FGSG_01771 FGSG_01824 FGSG_02018 FGSG_02050 FGSG_02052 FGSG_02125 FGSG_02248 FGSG_02309 FGSG_02354 FGSG_02428 FGSG_02651 FGSG_02760 FGSG_02953 FGSG_03094 FGSG_03172 FGSG_03279 FGSG_03310 FGSG_03372 FGSG_03412 FGSG_03547 FGSG_03692 FGSG_03693 FGSG_03735 FGSG_03736 FGSG_03737 FGSG_03738 FGSG_03790 FGSG_03802 FGSG_03824 FGSG_03832 FGSG_03862 FGSG_04089 FGSG_04204 FGSG_04447 FGSG_04504 FGSG_04626 FGSG_04780 FGSG_05062 FGSG_05724 FGSG_05805 FGSG_05809 FGSG_05828 FGSG_05851 FGSG_05938 FGSG_06117 FGSG_06331 FGSG_06336 FGSG_06439 FGSG_06550 FGSG_06610 FGSG_06699 FGSG_06786 FGSG_07375 FGSG_07588 FGSG_07663 FGSG_07665 FGSG_07798 FGSG_07800 FGSG_07801 FGSG_07802 FGSG_07803 FGSG_07804 FGSG_07805 FGSG_07815 FGSG_07832 FGSG_07842 FGSG_07894 FGSG_08246 FGSG_08554 FGSG_08580 FGSG_08827 FGSG_08829 FGSG_08830 FGSG_09051 FGSG_09098 FGSG_09354 FGSG_10081 FGSG_10083 FGSG_10098 FGSG_10404 FGSG_10521 FGSG_10555 FGSG_10655 FGSG_10803 FGSG_10843 FGSG_10923 FGSG_11119 FGSG_11211 FGSG_11224 FGSG_11251 FGSG_12281 FGSG_12445 FGSG_12666 FGSG_12882 FGSG_12939 FGSG_12977 FGSG_13222 FGSG_13611 FGSG_13736 FGSG_13759 FGSG_13870 FGSG_13983 The comparison is done to p3_p13839_Fus_grami_v32 containing 13826 annotated genes. 99 out of 112 genes are found: FGSG_00172 FGSG_00267 FGSG_00642 FGSG_00742 FGSG_01060 FGSG_01139 FGSG_01531 FGSG_01594 FGSG_01736 FGSG_01751 FGSG_01771 FGSG_02018 FGSG_02050 FGSG_02052 FGSG_02125 FGSG_02248 FGSG_02309 FGSG_02354 FGSG_02428 FGSG_02651 FGSG_02760 FGSG_02953 FGSG_03094 FGSG_03172 FGSG_03279 FGSG_03310 FGSG_03372 FGSG_03412 FGSG_03547 FGSG_03692 FGSG_03693 FGSG_03737 FGSG_03738 FGSG_03790 FGSG_03802 FGSG_03824 FGSG_03832 FGSG_03862 FGSG_04089 FGSG_04204 FGSG_04447 FGSG_04504 FGSG_04626 FGSG_04780 FGSG_05062 FGSG_05724 FGSG_05805 FGSG_05809 FGSG_05828 FGSG_05851 FGSG_05938 FGSG_06117 FGSG_06336 FGSG_06439 FGSG_06550 FGSG_06610 FGSG_06699 FGSG_06786 FGSG_07375 FGSG_07588 FGSG_07663 FGSG_07665 FGSG_07798 FGSG_07801 FGSG_07802 FGSG_07815 FGSG_07832 FGSG_07842 FGSG_07894 FGSG_08246 FGSG_08554 FGSG_08580 FGSG_08829 FGSG_08830 FGSG_09051 FGSG_09354 FGSG_10081 FGSG_10083 FGSG_10098 FGSG_10404 FGSG_10555 FGSG_10655 FGSG_10803 FGSG_10843 FGSG_10923 FGSG_11211 FGSG_11251 FGSG_12281 FGSG_12445 FGSG_12666 FGSG_12882 FGSG_12939 FGSG_12977 FGSG_13222 FGSG_13611 FGSG_13736 FGSG_13759 FGSG_13870 FGSG_13983 k Filter FUNCTIONAL CATEGORY abs SET rel SET genes SET abs GENOME rel GENOME rel SET/rel GENOME P-VALUE Bonferroni_corr FDR "20.01.01.01.01 heavy metal ion transport (Cu+, Fe3+, etc.)" 8 8.08 FGSG_02248 FGSG_03737 FGSG_03692 FGSG_03412 FGSG_04780 FGSG_07665 FGSG_07894 FGSG_10655 99 0.71 11.38028169 5.20E-07 34.01.01 homeostasis of cations 12 12.1 FGSG_02248 FGSG_03737 FGSG_03692 FGSG_03412 FGSG_03172 FGSG_04780 FGSG_07665 FGSG_07832 FGSG_07894 FGSG_08830 FGSG_10404 FGSG_10655 290 2.09 5.789473684 1.05E-06 34.01 homeostasis 12 12.1 FGSG_02248 FGSG_03737 FGSG_03692 FGSG_03412 FGSG_03172 FGSG_04780 FGSG_07665 FGSG_07832 FGSG_07894 FGSG_08830 FGSG_10404 FGSG_10655 336 2.43 4.979423868 4.84E-06 20.01.01.01.01.01 siderophore-iron transport 5 5.05 FGSG_03737 FGSG_03692 FGSG_04780 FGSG_07665 FGSG_10655 41 0.29 17.4137931 1.04E-05 "34.01.01.01 homeostasis of metal ions (Na, K, Ca etc.)" 9 9.09 FGSG_02248 FGSG_03737 FGSG_03692 FGSG_03412 FGSG_04780 FGSG_07665 FGSG_07832 FGSG_08830 FGSG_10655 208 1.5 6.06 1.78E-05 20.01.01 ion transport 11 11.1 FGSG_02248 FGSG_03737 FGSG_03692 FGSG_03412 FGSG_03172 FGSG_04780 FGSG_07665 FGSG_07894 FGSG_08830 FGSG_10404 FGSG_10655 321 2.32 4.784482759 1.82E-05 20.09.18 cellular import 13 13.1 FGSG_02018 FGSG_02125 FGSG_02248 FGSG_03737 FGSG_03692 FGSG_03412 FGSG_03172 FGSG_04780 FGSG_06336 FGSG_07665 FGSG_07894 FGSG_10404 FGSG_10655 519 3.75 3.493333333 8.15E-05 "20.01.01.01 cation transport (H+, Na+, K+, Ca2+ , NH4+, etc.)" 9 9.09 FGSG_02248 FGSG_03737 FGSG_03692 FGSG_03412 FGSG_04780 FGSG_07665 FGSG_07894 FGSG_08830 FGSG_10655 269 1.94 4.68556701 0.000131306 34.01.03.03 homeostasis of phosphate 3 3.03 FGSG_03172 FGSG_07894 FGSG_10404 15 0.1 30.3 0.000152222 20.01 transported compounds (substrates) 24 24.2 FGSG_01531 FGSG_02248 FGSG_04204 FGSG_03862 FGSG_03738 FGSG_03737 FGSG_03692 FGSG_03547 FGSG_03412 FGSG_03279 FGSG_03172 FGSG_04780 FGSG_06336 FGSG_07663 FGSG_07665 FGSG_07802 FGSG_07842 FGSG_07894 FGSG_08830 FGSG_09354 FGSG_10098 FGSG_10404 FGSG_10655 FGSG_10923 1597 11.5 2.104347826 0.000296088 20.01.01.07.07 phosphate transport 3 3.03 FGSG_03172 FGSG_07894 FGSG_10404 21 0.15 20.2 0.000431288 34 INTERACTION WITH THE ENVIRONMENT 15 15.1 FGSG_02125 FGSG_02248 FGSG_03832 FGSG_03737 FGSG_03692 FGSG_03412 FGSG_03172 FGSG_04780 FGSG_07665 FGSG_07832 FGSG_07894 FGSG_08830 FGSG_09354 FGSG_10404 FGSG_10655 832 6.01 2.512479201 0.000812769 "32.05 disease, virulence and defense" 11 11.1 FGSG_02125 FGSG_03862 FGSG_03310 FGSG_05805 FGSG_06439 FGSG_07663 FGSG_07798 FGSG_07802 FGSG_08830 FGSG_10081 FGSG_10098 507 3.66 3.032786885 0.00098871 20.01.27 drug/toxin transport 6 6.06 FGSG_03862 FGSG_03737 FGSG_07665 FGSG_07802 FGSG_08830 FGSG_10098 171 1.23 4.926829268 0.001422122 "20 CELLULAR TRANSPORT, TRANSPORT FACILITIES AND TRANSPORT ROUTES" 26 26.2 FGSG_01531 FGSG_02018 FGSG_02125 FGSG_02248 FGSG_04204 FGSG_03862 FGSG_03738 FGSG_03737 FGSG_03692 FGSG_03547 FGSG_03412 FGSG_03279 FGSG_03172 FGSG_04780 FGSG_06336 FGSG_07663 FGSG_07665 FGSG_07802 FGSG_07842 FGSG_07894 FGSG_08830 FGSG_09354 FGSG_10098 FGSG_10404 FGSG_10655 FGSG_10923 2007 14.5 1.806896552 0.001537561 20.03 transport facilities 14 14.1 FGSG_02248 FGSG_04204 FGSG_03862 FGSG_03547 FGSG_03412 FGSG_03279 FGSG_03172 FGSG_06336 FGSG_07663 FGSG_07802 FGSG_08830 FGSG_10098 FGSG_10404 FGSG_10923 808 5.84 2.414383562 0.001789876 34.01.03 homeostasis of anions 3 3.03 FGSG_03172 FGSG_07894 FGSG_10404 36 0.26 11.65384615 0.002142135 20.09.16.01 Type I protein secretion system (ABC-type transport systems) 3 3.03 FGSG_03862 FGSG_07802 FGSG_08830 39 0.28 10.82142857 0.002699683 20.03.02.02.02 sodium driven symporter 2 2.02 FGSG_03172 FGSG_10404 12 0.08 25.25 0.003196902 20.09 transport routes 17 17.1 FGSG_02018 FGSG_02125 FGSG_02248 FGSG_03862 FGSG_03737 FGSG_03692 FGSG_03412 FGSG_03172 FGSG_04780 FGSG_06336 FGSG_07665 FGSG_07802 FGSG_07894 FGSG_08830 FGSG_10098 FGSG_10404 FGSG_10655 1237 8.94 1.912751678 0.006503254 20.01.01.07 anion transport 3 3.03 FGSG_03172 FGSG_07894 FGSG_10404 65 0.47 6.446808511 0.011287515 "32 CELL RESCUE, DEFENSE AND VIRULENCE" 18 18.1 FGSG_00172 FGSG_02125 FGSG_03862 FGSG_03832 FGSG_03737 FGSG_03310 FGSG_05805 FGSG_06439 FGSG_06550 FGSG_06610 FGSG_07375 FGSG_07663 FGSG_07665 FGSG_07798 FGSG_07802 FGSG_08830 FGSG_10081 FGSG_10098 1452 10.5 1.723809524 0.014168611 32.07.05 detoxification by export 4 4.04 FGSG_03862 FGSG_07802 FGSG_08830 FGSG_10098 139 1 4.04 0.01766099 01.05.03.03 chitin metabolism 2 2.02 FGSG_02354 FGSG_06550 31 0.22 9.181818182 0.020622722 01.25.11 extracellular aminosaccharide degradation 1 1.01 FGSG_02354 3 0.02 50.5 0.021329351 "32.05.05 virulence, disease factors" 5 5.05 FGSG_03310 FGSG_05805 FGSG_07663 FGSG_07798 FGSG_10081 222 1.6 3.15625 0.021605877 01.06.05 fatty acid metabolism 4 4.04 FGSG_01531 FGSG_03547 FGSG_03094 FGSG_11211 157 1.13 3.575221239 0.026232992 16.05 polysaccharide binding 2 2.02 FGSG_02125 FGSG_02354 38 0.27 7.481481481 0.030188586 32.07 detoxification 8 8.08 FGSG_00172 FGSG_03862 FGSG_03737 FGSG_05805 FGSG_07665 FGSG_07802 FGSG_08830 FGSG_10098 520 3.76 2.14893617 0.032858296 32.05.01 resistance proteins 4 4.04 FGSG_03862 FGSG_07802 FGSG_08830 FGSG_10098 172 1.24 3.258064516 0.034999039 42.27.01 extracellular matrix 1 1.01 FGSG_02125 5 0.03 33.66666667 0.035298087 20.03.25 ABC transporters 3 3.03 FGSG_03862 FGSG_07802 FGSG_08830 106 0.76 3.986842105 0.040466007 20.09.16 cellular export and secretion 5 5.05 FGSG_03862 FGSG_03412 FGSG_07802 FGSG_08830 FGSG_10098 268 1.93 2.616580311 0.043342513 20.09.18.07 non-vesicular cellular import 5 5.05 FGSG_02248 FGSG_03737 FGSG_03412 FGSG_06336 FGSG_07665 278 2.01 2.512437811 0.049347367 " To correct for multiple comparisons in multiple hypothesis testing for the 845 taxonomical allowed FunCats, we calculated the Bonferroni correction as well as the False discovery rate (FDR) control with an experiment-wide significance level alpha of 0.05. The table is sorted by the p-value (k position). You will find as filter the holding criteria B=Bonferroni correction < 0.05, F:p-value < False discovery rate and *:p-value < 0.05."